Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940451.1_cds_XP_016484671.1_75665
CDS Infomation

[gene=LOC107805192] [db_xref=GeneID:107805192] [protein=protein MICRORCHIDIA 7-like] [protein_id=XP_016484671.1] [location=join(87918..88383,89937..90011,90151..90185,90258..90336,90567..90659,90779..90863,90972..91047,91276..91404,91566..91664,91745..91846,92013..92174,92277..92372,92620..92671,92802..92913,92983..93277,93703..93755,93851..93914,94004..94126,94219..94305)] [gbkey=CDS]
Sequence

ATGAGTACTCTCCCTATCAAGGAAGAAATCGTCGACCCAACAGACAACTTAGATATACCA
ACAAACAGTACTACTGCTATGATGATTCCTGTAAGCAGTAGCAATGTTTTTTTTGGTTCT
TGTTTTGATTATAGTGATGATGATATGGAAGGAATTAGTCCATTGAAAAAGATGAGAGCA
GAAGCTGCTTTGCCAGTAGGGTTTGTTGATCCTCTTCCTCCCGAAGAGCGTGCGGCATGG
CAACAGTCTCGTATTAATGCTGGCAAGGCTAGTAGTATTGGTTTTATTGCTCCTTTGCGG
TCGGTTCGTCCAAAAGCCGAGTATCGTGACGTACCTTTTTCGCGCAATGATCAGCTGGTA
GTAGTGGCTGGAGAAAAGCAGGTTGTTGCTCCTGCTAATATTCCAAGTTGTAAGCAGTTC
TGGAAAGCTGGAGATTATGAAGGCATTGATGGTGGTTTTTCTGCTGTTGGCATGGATCAT
GTGAGGGTTCACCCAAAATTCTTGCATTCAAATGCCACCAGTCATAAATGGGCTTTGGGA
GCTTTTGCTGAGCTTCTAGACAATGCTATGGACGAGGTTTGCAATGGAGCTACCTATGTC
AGCGTAGATGTGCTTGACAACAAGAAAGAGAAGGGCAAAATGTTATTAGTTGAAGATAAT
GGCGGTGGAATGACTCCTGATAAAATGCGCCAATGCATGTCTCTTGGATATTCTGCAAAA
AGCAAATTAGCAAATACCATTGGCCAATATGGAAATGGTTTCAAGACCAGTAGTATGAGA
CTAGGGGCAGATGTGATTGTATTCTCGCGTTGTCAGGGAAGGGACGGAACAAGCACAACA
CAAAGTGTTGGAATGTTGTCATATACATTTTTAAGGAGCACAGGAAAAGAAGATATTGTT
GTTCCAATGATTGATTTTGTGAAGAGAGAAGAAACTTGGGAAATGCTGACTCGATCTTCA
GTTGATGACTGGAAAAGAAATTCAGAAACGATAGTACAATGGTCTGCTTATGAAAGTGAA
GAGGATCTCTTCCAGCAGTTTGAATTATTGAATGATCAAGGCACACGAATTATCATATAC
AATCTTTGGGAGGATGAAGAAGGAGCAACAGAACTTGACTTTGACACCGATCCACAAGAC
ATTCAAATCAGGGGTGTTAGTCGAGATGAAAAGAAGATTGAGATGGCAAAACAATATCCT
AACTCCAGGCATTTTCTAACTTATCAGCATTCTTTAAGGAGTTATGCTTCAATTTTGTAT
CTGAGGCTAGCTCCTGGATTTCGAATAATTTTGCGGGGAAAAGATGTTGAACATCATAAT
TTGGTAAATGACATGATGTTATCTGAGGAAATCACCTACAGACCGCAACCCGTTGGTGAT
GAAACATCCAAGGATCCAAATGCGGTAGCTGTGGTAACCATTGGTTTTGTGAAAGATGCA
GAACATCACATTGATATTCAAGGTTTCAATGTTTATCACAAGAACCGGCTAATTAAGCCT
TTCTGGAGGGTGTGGAATGCTGCTGGAAGTGATGGTCGTGGCGCGATAGGTGTCTTAGAA
GCTAATTTTGTCGAACCAGCTCATGATAAACAGGGTTTTGAGCGCACAATTGTCCTAGCT
AGACTTGAGGCTCGTTTACAAGCGATGCAGAAGAAGTATTGGTCTTCAAACTGCCATTTA
ATTGGTTATGCTAAGCGTCGCAATGTAAAGAACAGTGTCTCTCCTGAGAAAGAAACGAAC
ACTTGTGCTAACAGCAAGTCCTGTTCCCGGTTTTCCTCCAACGGCCACACAACTTATAAT
GACAAATCTAAATCCAAATCCACTGGAGGAGAACACGAGAAGGGACCAGTTCATTCTTCA
ACACAAGCGAGAAACCAGACTATGTCTGGAGAAACTCAGCAAGCGCGTTTATCAAATAAG
CAAACTGCTCAAACTCCAGGAATTTCAGTTGTGAAGGTGGAAGATACTGTGTCCAACTTG
AGAGAAGAGAATCAGAGTACTAAGAATAGTTTACAACAAGTATTGCGCGATTTGCAGTAT
GAAAGAGACAGGAATAGGACTCTAGAAGGCAAACTTAAGGCAGCAGAAAAGAGGATATCA
GACCTTGACAACAATCATGACAATTTAGCTCTCATGCTTATAGAAGAAAGAAGACATTGG
CAACAAGAAGAAGAGAGTTTAAGATGCAGATTAAAGGATGCTTCTGTTACCATAGACGGG
CTGCTCAAGAAAGTGAAGGTGCTAGAAAGTAGGATAACCTTTAGTTGCAAAACCGAACGT
TGA

Peptide Sequence

PEP ID

XP_016484671.1
PEP Infomation

PREDICTED: protein MICRORCHIDIA 7-like [Nicotiana tabacum]
Sequence

MSTLPIKEEIVDPTDNLDIPTNSTTAMMIPVSSSNVFFGSCFDYSDDDMEGISPLKKMRA
EAALPVGFVDPLPPEERAAWQQSRINAGKASSIGFIAPLRSVRPKAEYRDVPFSRNDQLV
VVAGEKQVVAPANIPSCKQFWKAGDYEGIDGGFSAVGMDHVRVHPKFLHSNATSHKWALG
AFAELLDNAMDEVCNGATYVSVDVLDNKKEKGKMLLVEDNGGGMTPDKMRQCMSLGYSAK
SKLANTIGQYGNGFKTSSMRLGADVIVFSRCQGRDGTSTTQSVGMLSYTFLRSTGKEDIV
VPMIDFVKREETWEMLTRSSVDDWKRNSETIVQWSAYESEEDLFQQFELLNDQGTRIIIY
NLWEDEEGATELDFDTDPQDIQIRGVSRDEKKIEMAKQYPNSRHFLTYQHSLRSYASILY
LRLAPGFRIILRGKDVEHHNLVNDMMLSEEITYRPQPVGDETSKDPNAVAVVTIGFVKDA
EHHIDIQGFNVYHKNRLIKPFWRVWNAAGSDGRGAIGVLEANFVEPAHDKQGFERTIVLA
RLEARLQAMQKKYWSSNCHLIGYAKRRNVKNSVSPEKETNTCANSKSCSRFSSNGHTTYN
DKSKSKSTGGEHEKGPVHSSTQARNQTMSGETQQARLSNKQTAQTPGISVVKVEDTVSNL
REENQSTKNSLQQVLRDLQYERDRNRTLEGKLKAAEKRISDLDNNHDNLALMLIEERRHW
QQEEESLRCRLKDASVTIDGLLKKVKVLESRITFSCKTER

Transcript Sequence

Gene sequence data has not been registered.